illustration of DNA strand and abstract shapes on a computer screen on a green gradient background

Medical, health, and genomics

Digital pathology helps decode tumor microenvironments for precision immunotherapy. GigaPath is a novel vision transformer that can scale to gigapixel whole-slide images by adapting dilated attention for digital pathology. In joint work with Providence and UW, we’re sharing Prov-GigaPath, the first whole-slide pathology foundation model pretrained on large-scale real-world data, for advancing clinical research and discovery.

GigaPath: Whole-Slide Foundation Model for Digital Pathology

Research Forum Ep2 | Panel | Transforming the Natural Sciences with AI

Research Forum 2 | Panel Discussion: Transforming the Natural Sciences with AI

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Scaling early detection of esophageal cancer with AI

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Microsoft Health Futures

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Publication

Linking DICOM pixel data with radiology reports using automatic semantic annotation

Sayan D. Pathak, Woojin Kim, Indeera Munasinghe, Antonio Criminisi, Steve White, Khan Siddiqui

Proceedings of SPIE | February 2012, Vol 8319: pp. 85-90

Video

Think Computer Science ’11 Talks – Breathing Life Into Computer Programs

February 9, 2012 | Neeltje Berger, Jasmin Fisher

Jasmin Fisher, researcher at Microsoft Research Cambridge, talks about computer programs that mimic aspects of biological behaviours. This talk includes a video, ‘Introduction to Cells,’ shown with the permission of its creator, the owner of…

Publication

High-avidity, high-IFNÎ³-producing CD8 T-cell responses following immune selection during HIV-1 infection

Niamh M. Keane, Stevens G. Roberts, Coral-Ann M. Almedia, Tanya Krishnan, Abha Chopra, Emma Demaine, Rebecca Laird, Monika Tschochner, Jonathan M. Carlson, Simon Mallal, David Heckerman, Ian James, Mina John

Immunology and Cell Biology | February 2012, Vol 90(2): pp. 224-234

Video

High-throughput, Multiscale modelling approaches for understanding bacterial signalling

January 5, 2012 | Benjamin Hall

Bacterial chemoreceptor proteins respond to local nutrients and toxins through binding events in receptor domains in the periplasm, causing a conformational change which is propagated into the cell where it triggers a signalling event through…

0:53:22

Publication

Joint Modelling of Confounding Factors and Prominent Genetic Regulators Provides Increased Accuracy in Genetical Genomics Studies

Nicolo Fusi, Oliver Stegle, Neil D. Lawrence

PLOS Computational Biology | January 2012

Publication

CTL Responses of High Functional Avidity and Broad Variant Cross-Reactivity Are Associated with HIV Control

Beatriz Mothe, Anuska Llano, Javier Ibarrondo, Jennifer Zamarreno, Mattia Schiaulini, Cristina Miranda, Marta Ruiz-Riol, Christoph T. Berger, M. Jose Herrero, Eduard Palou, Montse Plana, Morgane Rolland, Ashok Khatri, David Heckerman, Florencia Pereyra, Bruce D. Walker, David Weiner, Roger Paredes, Bonaventura Clotet, Barbara K. Felber, George N. Pavlakis, James I. Mullins, Chirstian Brander

PLoS ONE | January 2012, pp. e29717

Publication